Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ubqln1Q8R317 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Ubqln1Q8R317 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Ubqln1Q8R317 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ubqln1Q8R317 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.55
Ubqln1Q8R317 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Gm24934-201ENSMUST00000103764 111 ntBASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Gm14723-201ENSMUST00000118686 215 ntBASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Ubqln1Q8R317 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Gm24830-201ENSMUST00000102024 166 ntBASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Gm4034-201ENSMUST00000187674 480 ntBASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.57□□□□□ -0.56
Ubqln1Q8R317 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms