Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Gm22711-201ENSMUST00000116890 133 ntBASIC13.75□□□□□ -0.21
Syne4Q8CII8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Gm18367-201ENSMUST00000176139 600 ntBASIC13.75□□□□□ -0.21
Syne4Q8CII8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.75□□□□□ -0.21
Syne4Q8CII8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.75□□□□□ -0.21
Syne4Q8CII8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Syne4Q8CII8 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.74□□□□□ -0.21
Syne4Q8CII8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.74□□□□□ -0.21
Syne4Q8CII8 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.74□□□□□ -0.21
Syne4Q8CII8 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Gm13600-201ENSMUST00000117949 744 ntBASIC13.74□□□□□ -0.21
Syne4Q8CII8 Gm16166-201ENSMUST00000118291 787 ntBASIC13.74□□□□□ -0.21
Syne4Q8CII8 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.74□□□□□ -0.21
Syne4Q8CII8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Gm45594-201ENSMUST00000211717 241 ntBASIC13.74□□□□□ -0.21
Syne4Q8CII8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Syne4Q8CII8 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms