Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28aQ8CEI3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc28aQ8CEI3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Gm12502-201ENSMUST00000120197 444 ntBASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Auts2-212ENSMUST00000178555 309 ntBASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28aQ8CEI3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28aQ8CEI3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28aQ8CEI3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28aQ8CEI3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28aQ8CEI3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28aQ8CEI3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28aQ8CEI3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28aQ8CEI3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28aQ8CEI3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Gm10076-201ENSMUST00000073238 384 ntBASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Gm10268-201ENSMUST00000085340 555 ntBASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc28aQ8CEI3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc28aQ8CEI3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms