Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.57□□□□□ -0.4
Trub1Q8C0D0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Gm14726-201ENSMUST00000120623 896 ntBASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Gm43630-201ENSMUST00000201550 776 ntBASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Cts7-204ENSMUST00000225321 1257 ntBASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Gm10312-201ENSMUST00000078515 489 ntBASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trub1Q8C0D0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Gm14644-201ENSMUST00000116671 647 ntBASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Gm12036-201ENSMUST00000120008 530 ntBASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Gm31256-201ENSMUST00000194705 506 ntBASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Gm45865-201ENSMUST00000211815 945 ntBASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms