Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Gm3332-201ENSMUST00000189337 928 ntBASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Gm45118-201ENSMUST00000208928 825 ntBASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sh3rf2Q8BZT2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Gm26286-201ENSMUST00000104166 134 ntBASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Gm12164-201ENSMUST00000121695 551 ntBASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Mir1943-201ENSMUST00000158276 73 ntBASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Gm8343-201ENSMUST00000182705 994 ntBASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh3rf2Q8BZT2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Gm11509-201ENSMUST00000117358 325 ntBASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Gm19353-201ENSMUST00000184561 445 ntBASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.34□□□□□ -0.43
Sh3rf2Q8BZT2 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms