Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm5982-201ENSMUST00000196234 512 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm43610-201ENSMUST00000199117 365 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm25053-202ENSMUST00000199731 132 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm20414-201ENSMUST00000172918 646 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col16a1Q8BLX7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Gm15003-201ENSMUST00000118884 446 ntBASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Gm15374-201ENSMUST00000119313 844 ntBASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Gm8436-201ENSMUST00000210152 1080 ntBASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Gm5749-201ENSMUST00000210673 1090 ntBASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Gm10263-201ENSMUST00000085163 300 ntBASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col16a1Q8BLX7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Gm18294-201ENSMUST00000176980 1748 ntBASIC15.68■□□□□ 0.1
Col16a1Q8BLX7 Gm11470-201ENSMUST00000118868 1475 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gm6322-201ENSMUST00000118789 1004 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 AC238811.4-201ENSMUST00000178019 1246 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 AC238940.3-201ENSMUST00000178830 1246 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms