Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Gm25545-201ENSMUST00000122673 323 ntBASIC17.02■□□□□ 0.31
Usp54Q8BL06 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Gm8436-201ENSMUST00000210152 1080 ntBASIC17.02■□□□□ 0.31
Usp54Q8BL06 Gm5749-201ENSMUST00000210673 1090 ntBASIC17.02■□□□□ 0.31
Usp54Q8BL06 AC168279.1-201ENSMUST00000214611 382 ntBASIC17.02■□□□□ 0.31
Usp54Q8BL06 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Gm25201-201ENSMUST00000083093 170 ntBASIC17.02■□□□□ 0.31
Usp54Q8BL06 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp54Q8BL06 Gm42748-201ENSMUST00000199354 2341 ntBASIC17.02■□□□□ 0.31
Usp54Q8BL06 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Gm38385-201ENSMUST00000194454 2351 ntBASIC17.01■□□□□ 0.31
Usp54Q8BL06 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Gm18201-201ENSMUST00000174735 875 ntBASIC17.01■□□□□ 0.31
Usp54Q8BL06 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Gm43380-201ENSMUST00000200421 220 ntBASIC17.01■□□□□ 0.31
Usp54Q8BL06 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 AC153929.1-201ENSMUST00000219009 303 ntBASIC17.01■□□□□ 0.31
Usp54Q8BL06 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Usp54Q8BL06 n-R5s185-201ENSMUST00000083953 119 ntBASIC17.01■□□□□ 0.31
Usp54Q8BL06 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp54Q8BL06 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
Usp54Q8BL06 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC17■□□□□ 0.31
Usp54Q8BL06 Gm13549-201ENSMUST00000118339 796 ntBASIC17■□□□□ 0.31
Usp54Q8BL06 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Gm25492-201ENSMUST00000157383 129 ntBASIC17■□□□□ 0.31
Usp54Q8BL06 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC17■□□□□ 0.31
Usp54Q8BL06 Gm17709-201ENSMUST00000174536 1096 ntBASIC17■□□□□ 0.31
Usp54Q8BL06 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC17■□□□□ 0.31
Usp54Q8BL06 Gm7959-201ENSMUST00000221823 1078 ntBASIC17■□□□□ 0.31
Usp54Q8BL06 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC17■□□□□ 0.31
Usp54Q8BL06 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC17■□□□□ 0.31
Usp54Q8BL06 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC17■□□□□ 0.31
Usp54Q8BL06 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp54Q8BL06 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Usp54Q8BL06 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Usp54Q8BL06 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp54Q8BL06 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Usp54Q8BL06 Gm25053-201ENSMUST00000103982 133 ntBASIC16.99■□□□□ 0.31
Usp54Q8BL06 Gm25922-201ENSMUST00000104281 130 ntBASIC16.99■□□□□ 0.31
Usp54Q8BL06 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Usp54Q8BL06 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Usp54Q8BL06 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp54Q8BL06 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp54Q8BL06 Gm12179-201ENSMUST00000118344 1272 ntBASIC16.99■□□□□ 0.31
Usp54Q8BL06 Gm11960-201ENSMUST00000122068 925 ntBASIC16.99■□□□□ 0.31
Usp54Q8BL06 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC16.99■□□□□ 0.31
Usp54Q8BL06 Gm24679-201ENSMUST00000158762 111 ntBASIC16.99■□□□□ 0.31
Usp54Q8BL06 Gm17889-201ENSMUST00000198410 598 ntBASIC16.99■□□□□ 0.31
Usp54Q8BL06 Gm25053-202ENSMUST00000199731 132 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms