Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ubp1Q811S7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.08□□□□□ -0.48
Ubp1Q811S7 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.08□□□□□ -0.48
Ubp1Q811S7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubp1Q811S7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Gm20482-202ENSMUST00000174729 825 ntBASIC12.07□□□□□ -0.48
Ubp1Q811S7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.07□□□□□ -0.48
Ubp1Q811S7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.07□□□□□ -0.48
Ubp1Q811S7 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.07□□□□□ -0.48
Ubp1Q811S7 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.07□□□□□ -0.48
Ubp1Q811S7 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubp1Q811S7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Ubp1Q811S7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.06□□□□□ -0.48
Ubp1Q811S7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.06□□□□□ -0.48
Ubp1Q811S7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm11930-201ENSMUST00000117788 190 ntBASIC12.06□□□□□ -0.48
Ubp1Q811S7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm17376-201ENSMUST00000166016 84 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms