Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim50Q810I2 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.89□□□□□ -0.51
Trim50Q810I2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim50Q810I2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Gm24830-201ENSMUST00000102024 166 ntBASIC11.88□□□□□ -0.51
Trim50Q810I2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.88□□□□□ -0.51
Trim50Q810I2 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.88□□□□□ -0.51
Trim50Q810I2 Gm38266-201ENSMUST00000194931 421 ntBASIC11.88□□□□□ -0.51
Trim50Q810I2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Gm26232-201ENSMUST00000083360 166 ntBASIC11.88□□□□□ -0.51
Trim50Q810I2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.88□□□□□ -0.51
Trim50Q810I2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.88□□□□□ -0.51
Trim50Q810I2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim50Q810I2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim50Q810I2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm23270-201ENSMUST00000104055 131 ntBASIC11.87□□□□□ -0.51
Trim50Q810I2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm14726-201ENSMUST00000120623 896 ntBASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gm8712-201ENSMUST00000221090 701 ntBASIC11.87□□□□□ -0.51
Trim50Q810I2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim50Q810I2 Olfr582-201ENSMUST00000098212 960 ntBASIC11.87□□□□□ -0.51
Trim50Q810I2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms