Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpp38Q80UU2 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.17□□□□□ -0.46
Rpp38Q80UU2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Gm32999-201ENSMUST00000192693 562 ntBASIC12.17□□□□□ -0.46
Rpp38Q80UU2 AA914427-201ENSMUST00000193194 1166 ntBASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Gm38317-201ENSMUST00000195564 343 ntBASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Rprl1-202ENSMUST00000198476 238 ntBASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Gm45598-202ENSMUST00000210719 986 ntBASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Rpp38Q80UU2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Rpp38Q80UU2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms