Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh19Q80TF3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Gm22133-201ENSMUST00000102082 109 ntBASIC12□□□□□ -0.49
Pcdh19Q80TF3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Gm16481-201ENSMUST00000119074 1227 ntBASIC12□□□□□ -0.49
Pcdh19Q80TF3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Gm17040-202ENSMUST00000170597 889 ntBASIC12□□□□□ -0.49
Pcdh19Q80TF3 Gm22119-201ENSMUST00000175594 99 ntBASIC12□□□□□ -0.49
Pcdh19Q80TF3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Gm9630-201ENSMUST00000178304 885 ntBASIC12□□□□□ -0.49
Pcdh19Q80TF3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Gm7430-201ENSMUST00000193824 1144 ntBASIC12□□□□□ -0.49
Pcdh19Q80TF3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh19Q80TF3 AC169036.1-201ENSMUST00000227994 296 ntBASIC12□□□□□ -0.49
Pcdh19Q80TF3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh19Q80TF3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Gm18711-201ENSMUST00000199341 750 ntBASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh19Q80TF3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms