Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.92□□□□□ -0.82
Vma21Q78T54 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Vma21Q78T54 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.91□□□□□ -0.82
Vma21Q78T54 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Gm18304-201ENSMUST00000189162 546 ntBASIC9.91□□□□□ -0.82
Vma21Q78T54 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Gm7561-201ENSMUST00000211203 886 ntBASIC9.91□□□□□ -0.82
Vma21Q78T54 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.91□□□□□ -0.82
Vma21Q78T54 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Vma21Q78T54 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.9□□□□□ -0.82
Vma21Q78T54 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.9□□□□□ -0.82
Vma21Q78T54 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Vma21Q78T54 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.9□□□□□ -0.82
Vma21Q78T54 Gm12490-201ENSMUST00000120255 560 ntBASIC9.9□□□□□ -0.82
Vma21Q78T54 Gm1335-201ENSMUST00000121653 386 ntBASIC9.9□□□□□ -0.82
Vma21Q78T54 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Gm23119-201ENSMUST00000158610 140 ntBASIC9.9□□□□□ -0.82
Vma21Q78T54 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.9□□□□□ -0.82
Vma21Q78T54 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Vma21Q78T54 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.9□□□□□ -0.82
Vma21Q78T54 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.9□□□□□ -0.82
Vma21Q78T54 Gm43818-201ENSMUST00000200605 466 ntBASIC9.9□□□□□ -0.82
Vma21Q78T54 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.9□□□□□ -0.82
Vma21Q78T54 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.9□□□□□ -0.82
Vma21Q78T54 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Vma21Q78T54 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Vma21Q78T54 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Vma21Q78T54 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Vma21Q78T54 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Vma21Q78T54 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms