Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Gm25043-201ENSMUST00000158604 212 ntBASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Gm38158-201ENSMUST00000194617 339 ntBASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Gm5187-201ENSMUST00000117317 991 ntBASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Gm42693-201ENSMUST00000196779 631 ntBASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssx9Q6XAS3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms