Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.71□□□□□ -0.53
Col12a1Q60847 Gm11736-201ENSMUST00000121468 505 ntBASIC11.71□□□□□ -0.53
Col12a1Q60847 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.71□□□□□ -0.53
Col12a1Q60847 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.71□□□□□ -0.53
Col12a1Q60847 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.71□□□□□ -0.53
Col12a1Q60847 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.71□□□□□ -0.53
Col12a1Q60847 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.71□□□□□ -0.53
Col12a1Q60847 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.71□□□□□ -0.54
Col12a1Q60847 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.71□□□□□ -0.54
Col12a1Q60847 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.71□□□□□ -0.54
Col12a1Q60847 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.71□□□□□ -0.54
Col12a1Q60847 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC11.71□□□□□ -0.54
Col12a1Q60847 Gm7525-201ENSMUST00000219425 454 ntBASIC11.71□□□□□ -0.54
Col12a1Q60847 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.71□□□□□ -0.54
Col12a1Q60847 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.71□□□□□ -0.54
Col12a1Q60847 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Col12a1Q60847 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.71□□□□□ -0.54
Col12a1Q60847 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col12a1Q60847 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col12a1Q60847 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Col12a1Q60847 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col12a1Q60847 Gm26272-201ENSMUST00000179241 132 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 Gm2553-201ENSMUST00000215986 605 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Gm10580-201ENSMUST00000097985 396 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 Gm10581-201ENSMUST00000097986 231 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 Gm10582-201ENSMUST00000097987 396 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 Gm10583-201ENSMUST00000097988 396 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Col12a1Q60847 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col12a1Q60847 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col12a1Q60847 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Col12a1Q60847 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC11.7□□□□□ -0.54
Col12a1Q60847 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Gm43163-201ENSMUST00000196571 442 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Col12a1Q60847 Gm5650-201ENSMUST00000209641 598 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.7□□□□□ -0.54
Col12a1Q60847 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col12a1Q60847 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col12a1Q60847 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm23745-201ENSMUST00000104230 125 ntBASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm27675-201ENSMUST00000184527 94 ntBASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm6450-201ENSMUST00000200896 574 ntBASIC11.69□□□□□ -0.54
Col12a1Q60847 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.69□□□□□ -0.54
Col12a1Q60847 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms