Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Gm14127-201ENSMUST00000117906 678 ntBASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Gm42599-201ENSMUST00000201308 469 ntBASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Gm25043-201ENSMUST00000158604 212 ntBASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Mir7085-201ENSMUST00000184353 66 ntBASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Gm10608-202ENSMUST00000213924 676 ntBASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav5d-4Q5R1F6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5d-4Q5R1F6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms