Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm43112-201ENSMUST00000196665 3122 ntBASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm14701-201ENSMUST00000117156 348 ntBASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm25948-201ENSMUST00000175334 112 ntBASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm24447-201ENSMUST00000083977 338 ntBASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav3-3Q5R1C3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Cog3-203ENSMUST00000227473 4197 ntBASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Gm37935-201ENSMUST00000192012 982 ntBASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Gm6888-201ENSMUST00000221983 706 ntBASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms