Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Gm4034-201ENSMUST00000187674 480 ntBASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Gm26286-201ENSMUST00000104166 134 ntBASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Gm45878-201ENSMUST00000211839 241 ntBASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 AC125117.2-201ENSMUST00000228344 1140 ntBASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h1Q4VGL6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h1Q4VGL6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h1Q4VGL6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
Rc3h1Q4VGL6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Rc3h1Q4VGL6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h1Q4VGL6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h1Q4VGL6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.08□□□□□ -0.15
Rc3h1Q4VGL6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Gm5419-201ENSMUST00000119301 527 ntBASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Gm25881-201ENSMUST00000157783 103 ntBASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Mir7677-201ENSMUST00000184226 67 ntBASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Gm3332-201ENSMUST00000189337 928 ntBASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Gm18893-201ENSMUST00000198416 943 ntBASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 AC102523.2-201ENSMUST00000227813 983 ntBASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Gm26448-201ENSMUST00000082446 203 ntBASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h1Q4VGL6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms