Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Arhgef40Q3UPH7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Arhgef40Q3UPH7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Arhgef40Q3UPH7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Arhgef40Q3UPH7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC17.63■□□□□ 0.41
Arhgef40Q3UPH7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC17.63■□□□□ 0.41
Arhgef40Q3UPH7 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Arhgef40Q3UPH7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Arhgef40Q3UPH7 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Gm12036-201ENSMUST00000120008 530 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Mir8093-201ENSMUST00000185043 137 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Gm9116-201ENSMUST00000192400 1018 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Ap3s1-202ENSMUST00000224622 978 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Gm38094-201ENSMUST00000195864 2978 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Gm25063-201ENSMUST00000104666 94 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Gm9089-201ENSMUST00000122027 526 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Gm6114-201ENSMUST00000182472 968 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Gm19015-201ENSMUST00000184002 1189 ntBASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Arhgef40Q3UPH7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Gm8899-201ENSMUST00000214635 1332 ntBASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Gm37391-201ENSMUST00000194891 2318 ntBASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Gm18463-201ENSMUST00000207258 474 ntBASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Gm18460-201ENSMUST00000208088 464 ntBASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Gm18204-201ENSMUST00000209835 793 ntBASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Arhgef40Q3UPH7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Gm18642-201ENSMUST00000206642 1400 ntBASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Gm15615-201ENSMUST00000118876 198 ntBASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Arhgef40Q3UPH7 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms