Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cops9Q3U898 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cops9Q3U898 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cops9Q3U898 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cops9Q3U898 Gm43760-201ENSMUST00000202120 3015 ntBASIC8.32□□□□□ -1.08
Cops9Q3U898 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cops9Q3U898 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC8.32□□□□□ -1.08
Cops9Q3U898 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cops9Q3U898 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cops9Q3U898 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cops9Q3U898 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cops9Q3U898 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC8.31□□□□□ -1.08
Cops9Q3U898 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Gm11524-201ENSMUST00000119349 807 ntBASIC8.31□□□□□ -1.08
Cops9Q3U898 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Gm26464-201ENSMUST00000157094 305 ntBASIC8.31□□□□□ -1.08
Cops9Q3U898 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Gm38223-201ENSMUST00000194484 695 ntBASIC8.31□□□□□ -1.08
Cops9Q3U898 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Gm8099-201ENSMUST00000200510 742 ntBASIC8.31□□□□□ -1.08
Cops9Q3U898 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cops9Q3U898 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cops9Q3U898 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC8.3□□□□□ -1.08
Cops9Q3U898 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Gm43963-201ENSMUST00000203466 2488 ntBASIC8.3□□□□□ -1.08
Cops9Q3U898 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Cops9Q3U898 Gm45428-201ENSMUST00000209619 1789 ntBASIC8.3□□□□□ -1.08
Cops9Q3U898 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cops9Q3U898 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Cops9Q3U898 Gm9361-201ENSMUST00000198695 1507 ntBASIC8.3□□□□□ -1.08
Cops9Q3U898 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC8.3□□□□□ -1.08
Cops9Q3U898 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC8.3□□□□□ -1.08
Cops9Q3U898 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Cops9Q3U898 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Cops9Q3U898 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cops9Q3U898 Gm42141-201ENSMUST00000196534 2172 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms