Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp25Q3U435 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Gm14247-201ENSMUST00000120950 237 ntBASIC11.48□□□□□ -0.57
Mmp25Q3U435 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.48□□□□□ -0.57
Mmp25Q3U435 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Gm27390-201ENSMUST00000184516 176 ntBASIC11.48□□□□□ -0.57
Mmp25Q3U435 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.48□□□□□ -0.57
Mmp25Q3U435 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.48□□□□□ -0.57
Mmp25Q3U435 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.48□□□□□ -0.57
Mmp25Q3U435 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp25Q3U435 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Gm7722-201ENSMUST00000120646 741 ntBASIC11.47□□□□□ -0.57
Mmp25Q3U435 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Gm17812-201ENSMUST00000204935 318 ntBASIC11.47□□□□□ -0.57
Mmp25Q3U435 Gm44262-201ENSMUST00000204969 372 ntBASIC11.47□□□□□ -0.57
Mmp25Q3U435 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Gm8913-201ENSMUST00000209491 641 ntBASIC11.47□□□□□ -0.57
Mmp25Q3U435 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.47□□□□□ -0.57
Mmp25Q3U435 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.47□□□□□ -0.57
Mmp25Q3U435 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Mmp25Q3U435 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp25Q3U435 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Mmp25Q3U435 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.46□□□□□ -0.57
Mmp25Q3U435 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms