Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Ccbe1Q3MI99 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.08□□□□□ -0.64
Ccbe1Q3MI99 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccbe1Q3MI99 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccbe1Q3MI99 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Cog3-203ENSMUST00000227473 4197 ntBASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Gm16215-201ENSMUST00000161990 637 ntBASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Gm9824-201ENSMUST00000178707 561 ntBASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Gm27772-201ENSMUST00000184900 187 ntBASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Gm18049-201ENSMUST00000208909 581 ntBASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Gm26670-201ENSMUST00000180429 3287 ntBASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ccbe1Q3MI99 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Gm13453-201ENSMUST00000118708 357 ntBASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Gm6447-201ENSMUST00000118905 835 ntBASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Gm29541-201ENSMUST00000191351 678 ntBASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Gm7653-201ENSMUST00000214567 508 ntBASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 AC115746.1-201ENSMUST00000228949 3617 ntBASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccbe1Q3MI99 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms