Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Sox9Q04887 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox9Q04887 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox9Q04887 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.62□□□□□ -0.39
Sox9Q04887 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox9Q04887 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox9Q04887 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sox9Q04887 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox9Q04887 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox9Q04887 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sox9Q04887 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.62□□□□□ -0.39
Sox9Q04887 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox9Q04887 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.62□□□□□ -0.39
Sox9Q04887 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox9Q04887 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox9Q04887 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox9Q04887 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sox9Q04887 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sox9Q04887 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Gm25076-201ENSMUST00000104098 132 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Gm11836-201ENSMUST00000121022 441 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Gm8451-201ENSMUST00000170338 447 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Gm9022-201ENSMUST00000182482 992 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Gm29499-201ENSMUST00000189151 486 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Gm28329-201ENSMUST00000191208 689 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Gm29171-201ENSMUST00000191397 486 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sox9Q04887 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox9Q04887 Gm18460-201ENSMUST00000208088 464 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox9Q04887 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox9Q04887 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Gm7536-201ENSMUST00000077389 444 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Gm5453-201ENSMUST00000080866 447 ntBASIC12.61□□□□□ -0.39
Sox9Q04887 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sox9Q04887 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox9Q04887 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox9Q04887 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox9Q04887 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Sox9Q04887 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox9Q04887 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.6□□□□□ -0.39
Sox9Q04887 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox9Q04887 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox9Q04887 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.6□□□□□ -0.39
Sox9Q04887 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Gm23680-201ENSMUST00000083162 164 ntBASIC12.6□□□□□ -0.39
Sox9Q04887 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox9Q04887 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox9Q04887 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.6□□□□□ -0.39
Sox9Q04887 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox9Q04887 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox9Q04887 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms