Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Col1a2Q01149 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.16■□□□□ 0.02
Col1a2Q01149 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Gm22711-201ENSMUST00000116890 133 ntBASIC15.16■□□□□ 0.02
Col1a2Q01149 Gm13916-201ENSMUST00000117368 628 ntBASIC15.16■□□□□ 0.02
Col1a2Q01149 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.16■□□□□ 0.02
Col1a2Q01149 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.16■□□□□ 0.02
Col1a2Q01149 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.16■□□□□ 0.02
Col1a2Q01149 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.16■□□□□ 0.02
Col1a2Q01149 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.16■□□□□ 0.02
Col1a2Q01149 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.16■□□□□ 0.02
Col1a2Q01149 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col1a2Q01149 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.15■□□□□ 0.02
Col1a2Q01149 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Gm7666-201ENSMUST00000146631 819 ntBASIC15.15■□□□□ 0.02
Col1a2Q01149 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Mir8115-201ENSMUST00000184992 119 ntBASIC15.15■□□□□ 0.02
Col1a2Q01149 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Col1a2Q01149 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Gm9136-201ENSMUST00000193368 454 ntBASIC15.15■□□□□ 0.02
Col1a2Q01149 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Gm17831-201ENSMUST00000205579 900 ntBASIC15.15■□□□□ 0.02
Col1a2Q01149 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Gm45113-201ENSMUST00000207518 165 ntBASIC15.15■□□□□ 0.02
Col1a2Q01149 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.15■□□□□ 0.02
Col1a2Q01149 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.15■□□□□ 0.02
Col1a2Q01149 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col1a2Q01149 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.15■□□□□ 0.02
Col1a2Q01149 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col1a2Q01149 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.14■□□□□ 0.01
Col1a2Q01149 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC15.14■□□□□ 0.01
Col1a2Q01149 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC15.14■□□□□ 0.01
Col1a2Q01149 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.14■□□□□ 0.01
Col1a2Q01149 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.14■□□□□ 0.01
Col1a2Q01149 Gm44551-201ENSMUST00000208804 171 ntBASIC15.14■□□□□ 0.01
Col1a2Q01149 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col1a2Q01149 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.14■□□□□ 0.01
Col1a2Q01149 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.14■□□□□ 0.01
Col1a2Q01149 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.14■□□□□ 0.01
Col1a2Q01149 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC15.14■□□□□ 0.01
Col1a2Q01149 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.14■□□□□ 0.01
Col1a2Q01149 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col1a2Q01149 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.14■□□□□ 0.01
Col1a2Q01149 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms