Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Gm15610-201ENSMUST00000120584 195 ntBASIC15.24■□□□□ 0.03
Nkx2-3P97334 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Gm8459-201ENSMUST00000162504 760 ntBASIC15.24■□□□□ 0.03
Nkx2-3P97334 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Gm9136-201ENSMUST00000193368 454 ntBASIC15.24■□□□□ 0.03
Nkx2-3P97334 Gm7430-201ENSMUST00000193824 1144 ntBASIC15.24■□□□□ 0.03
Nkx2-3P97334 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx2-3P97334 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Gm25517-201ENSMUST00000083865 134 ntBASIC15.24■□□□□ 0.03
Nkx2-3P97334 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nkx2-3P97334 AC166836.1-201ENSMUST00000219933 1795 ntBASIC15.24■□□□□ 0.03
Nkx2-3P97334 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Gm1848-201ENSMUST00000120711 789 ntBASIC15.23■□□□□ 0.03
Nkx2-3P97334 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC15.23■□□□□ 0.03
Nkx2-3P97334 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Gm21092-201ENSMUST00000178995 955 ntBASIC15.23■□□□□ 0.03
Nkx2-3P97334 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.23■□□□□ 0.03
Nkx2-3P97334 Gm44158-201ENSMUST00000203881 505 ntBASIC15.23■□□□□ 0.03
Nkx2-3P97334 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 AC112945.1-201ENSMUST00000226413 514 ntBASIC15.23■□□□□ 0.03
Nkx2-3P97334 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-3P97334 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.22■□□□□ 0.03
Nkx2-3P97334 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.22■□□□□ 0.03
Nkx2-3P97334 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-3P97334 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Mir6998-201ENSMUST00000183343 64 ntBASIC15.22■□□□□ 0.03
Nkx2-3P97334 Gm9645-201ENSMUST00000197131 792 ntBASIC15.22■□□□□ 0.03
Nkx2-3P97334 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.22■□□□□ 0.03
Nkx2-3P97334 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms