Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SgcdP82347 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcdP82347 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SgcdP82347 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SgcdP82347 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.36□□□□□ -0.59
SgcdP82347 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.36□□□□□ -0.59
SgcdP82347 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.36□□□□□ -0.59
SgcdP82347 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.36□□□□□ -0.59
SgcdP82347 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.36□□□□□ -0.59
SgcdP82347 Gm8463-201ENSMUST00000208573 613 ntBASIC11.36□□□□□ -0.59
SgcdP82347 Gm9257-201ENSMUST00000221254 232 ntBASIC11.36□□□□□ -0.59
SgcdP82347 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
SgcdP82347 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.36□□□□□ -0.59
SgcdP82347 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcdP82347 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.35□□□□□ -0.59
SgcdP82347 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
SgcdP82347 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
SgcdP82347 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Gm15371-201ENSMUST00000117057 784 ntBASIC11.35□□□□□ -0.59
SgcdP82347 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.35□□□□□ -0.59
SgcdP82347 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.35□□□□□ -0.59
SgcdP82347 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.35□□□□□ -0.59
SgcdP82347 Gm42550-201ENSMUST00000201553 960 ntBASIC11.35□□□□□ -0.59
SgcdP82347 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.35□□□□□ -0.59
SgcdP82347 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Gm7399-201ENSMUST00000032395 858 ntBASIC11.35□□□□□ -0.59
SgcdP82347 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.35□□□□□ -0.59
SgcdP82347 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcdP82347 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SgcdP82347 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcdP82347 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcdP82347 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.34□□□□□ -0.59
SgcdP82347 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcdP82347 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcdP82347 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms