Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Hmgb1P63158 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Hmgb1P63158 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hmgb1P63158 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.46□□□□□ -0.26
Hmgb1P63158 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hmgb1P63158 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.46□□□□□ -0.26
Hmgb1P63158 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hmgb1P63158 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Hmgb1P63158 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.46□□□□□ -0.26
Hmgb1P63158 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.46□□□□□ -0.26
Hmgb1P63158 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.45□□□□□ -0.26
Hmgb1P63158 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Gm23912-201ENSMUST00000104687 87 ntBASIC13.45□□□□□ -0.26
Hmgb1P63158 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Gm37201-201ENSMUST00000191845 523 ntBASIC13.45□□□□□ -0.26
Hmgb1P63158 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.45□□□□□ -0.26
Hmgb1P63158 Gm38359-201ENSMUST00000191884 2225 ntBASIC13.45□□□□□ -0.26
Hmgb1P63158 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.45□□□□□ -0.26
Hmgb1P63158 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb1P63158 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Mir1247-201ENSMUST00000116706 82 ntBASIC13.44□□□□□ -0.26
Hmgb1P63158 Gm13226-201ENSMUST00000117838 404 ntBASIC13.44□□□□□ -0.26
Hmgb1P63158 Gm14999-201ENSMUST00000121039 624 ntBASIC13.44□□□□□ -0.26
Hmgb1P63158 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.44□□□□□ -0.26
Hmgb1P63158 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hmgb1P63158 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Hmgb1P63158 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.44□□□□□ -0.26
Hmgb1P63158 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Hmgb1P63158 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb1P63158 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb1P63158 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb1P63158 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Hmgb1P63158 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb1P63158 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmgb1P63158 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.43□□□□□ -0.26
Hmgb1P63158 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmgb1P63158 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb1P63158 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb1P63158 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.43□□□□□ -0.26
Hmgb1P63158 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.43□□□□□ -0.26
Hmgb1P63158 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms