Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.72□□□□□ -0.69
Lsm6P62313 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Lsm6P62313 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.72□□□□□ -0.69
Lsm6P62313 Olfr284-202ENSMUST00000206647 966 ntBASIC10.72□□□□□ -0.69
Lsm6P62313 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Gm6013-201ENSMUST00000212264 699 ntBASIC10.72□□□□□ -0.69
Lsm6P62313 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Lsm6P62313 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lsm6P62313 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lsm6P62313 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.72□□□□□ -0.69
Lsm6P62313 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.72□□□□□ -0.69
Lsm6P62313 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.72□□□□□ -0.69
Lsm6P62313 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Lsm6P62313 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.72□□□□□ -0.69
Lsm6P62313 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.72□□□□□ -0.69
Lsm6P62313 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm6P62313 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Lsm6P62313 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Lsm6P62313 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.71□□□□□ -0.69
Lsm6P62313 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Lsm6P62313 Gm11531-201ENSMUST00000117614 555 ntBASIC10.71□□□□□ -0.69
Lsm6P62313 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.71□□□□□ -0.69
Lsm6P62313 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.71□□□□□ -0.69
Lsm6P62313 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Gm26956-201ENSMUST00000182176 986 ntBASIC10.71□□□□□ -0.69
Lsm6P62313 Gm27572-201ENSMUST00000183702 255 ntBASIC10.71□□□□□ -0.69
Lsm6P62313 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.71□□□□□ -0.69
Lsm6P62313 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.71□□□□□ -0.69
Lsm6P62313 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.71□□□□□ -0.69
Lsm6P62313 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.71□□□□□ -0.69
Lsm6P62313 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.71□□□□□ -0.69
Lsm6P62313 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Lsm6P62313 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Lsm6P62313 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Gm9996-201ENSMUST00000070359 913 ntBASIC10.71□□□□□ -0.69
Lsm6P62313 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Lsm6P62313 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.71□□□□□ -0.69
Lsm6P62313 Gm10478-201ENSMUST00000084451 396 ntBASIC10.71□□□□□ -0.69
Lsm6P62313 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.71□□□□□ -0.69
Lsm6P62313 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm6P62313 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Lsm6P62313 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lsm6P62313 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Lsm6P62313 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lsm6P62313 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
Lsm6P62313 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Lsm6P62313 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.71□□□□□ -0.7
Lsm6P62313 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.7□□□□□ -0.7
Lsm6P62313 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.7□□□□□ -0.7
Lsm6P62313 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.7□□□□□ -0.7
Lsm6P62313 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Lsm6P62313 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm6P62313 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.7□□□□□ -0.7
Lsm6P62313 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms