Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.79□□□□□ -0.36
NcanP55066 Gm5451-201ENSMUST00000080545 579 ntBASIC12.79□□□□□ -0.36
NcanP55066 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NcanP55066 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NcanP55066 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NcanP55066 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NcanP55066 Acot6-202ENSMUST00000222921 3622 ntBASIC12.79□□□□□ -0.36
NcanP55066 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.78□□□□□ -0.36
NcanP55066 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.78□□□□□ -0.36
NcanP55066 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.78□□□□□ -0.36
NcanP55066 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NcanP55066 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC12.78□□□□□ -0.36
NcanP55066 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NcanP55066 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
NcanP55066 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Gm24279-201ENSMUST00000104236 131 ntBASIC12.78□□□□□ -0.36
NcanP55066 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.78□□□□□ -0.36
NcanP55066 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Gm13204-201ENSMUST00000120110 821 ntBASIC12.78□□□□□ -0.36
NcanP55066 Gm14993-201ENSMUST00000121180 164 ntBASIC12.78□□□□□ -0.36
NcanP55066 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.78□□□□□ -0.36
NcanP55066 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC12.78□□□□□ -0.36
NcanP55066 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.78□□□□□ -0.36
NcanP55066 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Gm24954-201ENSMUST00000178831 110 ntBASIC12.78□□□□□ -0.36
NcanP55066 Gm26875-201ENSMUST00000181006 950 ntBASIC12.78□□□□□ -0.36
NcanP55066 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.78□□□□□ -0.36
NcanP55066 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
NcanP55066 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.78□□□□□ -0.36
NcanP55066 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Gm42816-201ENSMUST00000198433 325 ntBASIC12.78□□□□□ -0.36
NcanP55066 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.78□□□□□ -0.36
NcanP55066 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.78□□□□□ -0.36
NcanP55066 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.78□□□□□ -0.36
NcanP55066 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NcanP55066 Gm23105-201ENSMUST00000083719 134 ntBASIC12.78□□□□□ -0.36
NcanP55066 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NcanP55066 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.78□□□□□ -0.36
NcanP55066 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.78□□□□□ -0.36
NcanP55066 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NcanP55066 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.78□□□□□ -0.36
NcanP55066 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NcanP55066 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NcanP55066 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NcanP55066 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NcanP55066 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NcanP55066 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.77□□□□□ -0.36
NcanP55066 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.77□□□□□ -0.36
NcanP55066 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
NcanP55066 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NcanP55066 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.77□□□□□ -0.37
NcanP55066 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NcanP55066 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.77□□□□□ -0.37
NcanP55066 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NcanP55066 Gm4775-201ENSMUST00000169588 402 ntBASIC12.77□□□□□ -0.37
NcanP55066 Gm18552-201ENSMUST00000187425 538 ntBASIC12.77□□□□□ -0.37
NcanP55066 Gm38151-201ENSMUST00000195085 289 ntBASIC12.77□□□□□ -0.37
NcanP55066 Gm37826-201ENSMUST00000195329 322 ntBASIC12.77□□□□□ -0.37
NcanP55066 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NcanP55066 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NcanP55066 Gm45113-201ENSMUST00000207518 165 ntBASIC12.77□□□□□ -0.37
NcanP55066 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.77□□□□□ -0.37
NcanP55066 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.77□□□□□ -0.37
NcanP55066 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.77□□□□□ -0.37
NcanP55066 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NcanP55066 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.77□□□□□ -0.37
NcanP55066 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
NcanP55066 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms