Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.2□□□□□ -0.46
Fdft1P53798 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.2□□□□□ -0.46
Fdft1P53798 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.2□□□□□ -0.46
Fdft1P53798 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.2□□□□□ -0.46
Fdft1P53798 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.2□□□□□ -0.46
Fdft1P53798 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Fdft1P53798 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Fdft1P53798 Gm24136-201ENSMUST00000083374 165 ntBASIC12.2□□□□□ -0.46
Fdft1P53798 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Fdft1P53798 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fdft1P53798 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.19□□□□□ -0.46
Fdft1P53798 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.19□□□□□ -0.46
Fdft1P53798 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Fdft1P53798 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Fdft1P53798 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.19□□□□□ -0.46
Fdft1P53798 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Fdft1P53798 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Fdft1P53798 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.19□□□□□ -0.46
Fdft1P53798 Gm5187-201ENSMUST00000117317 991 ntBASIC12.19□□□□□ -0.46
Fdft1P53798 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.19□□□□□ -0.46
Fdft1P53798 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.19□□□□□ -0.46
Fdft1P53798 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Gm18304-201ENSMUST00000189162 546 ntBASIC12.19□□□□□ -0.46
Fdft1P53798 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.19□□□□□ -0.46
Fdft1P53798 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.19□□□□□ -0.46
Fdft1P53798 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Fdft1P53798 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Fdft1P53798 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Fdft1P53798 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Fdft1P53798 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.19□□□□□ -0.46
Fdft1P53798 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Fdft1P53798 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.19□□□□□ -0.46
Fdft1P53798 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fdft1P53798 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Fdft1P53798 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Fdft1P53798 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.18□□□□□ -0.46
Fdft1P53798 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.18□□□□□ -0.46
Fdft1P53798 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.18□□□□□ -0.46
Fdft1P53798 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.18□□□□□ -0.46
Fdft1P53798 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms