Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.1□□□□□ -0.79
Nkx2-1P50220 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Nkx2-1P50220 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.09□□□□□ -0.79
Nkx2-1P50220 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm12928-201ENSMUST00000117115 573 ntBASIC10.09□□□□□ -0.79
Nkx2-1P50220 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm16296-201ENSMUST00000159905 325 ntBASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm25927-201ENSMUST00000175058 117 ntBASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm22121-201ENSMUST00000175148 54 ntBASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.09□□□□□ -0.79
Nkx2-1P50220 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.09□□□□□ -0.79
Nkx2-1P50220 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.09□□□□□ -0.79
Nkx2-1P50220 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.09□□□□□ -0.79
Nkx2-1P50220 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-1P50220 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.08□□□□□ -0.8
Nkx2-1P50220 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.08□□□□□ -0.8
Nkx2-1P50220 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.08□□□□□ -0.8
Nkx2-1P50220 Gm4034-201ENSMUST00000187674 480 ntBASIC10.08□□□□□ -0.8
Nkx2-1P50220 Gm2495-201ENSMUST00000191160 466 ntBASIC10.08□□□□□ -0.8
Nkx2-1P50220 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.08□□□□□ -0.8
Nkx2-1P50220 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Nkx2-1P50220 Gm24136-201ENSMUST00000083374 165 ntBASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 118.8 ms