Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ercc3P49135 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc3P49135 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.48□□□□□ -0.09
Ercc3P49135 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ercc3P49135 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.48□□□□□ -0.09
Ercc3P49135 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.48□□□□□ -0.09
Ercc3P49135 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Ercc3P49135 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.48□□□□□ -0.09
Ercc3P49135 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.48□□□□□ -0.09
Ercc3P49135 Gm25668-201ENSMUST00000157700 129 ntBASIC14.48□□□□□ -0.09
Ercc3P49135 Gm9630-201ENSMUST00000178304 885 ntBASIC14.48□□□□□ -0.09
Ercc3P49135 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.48□□□□□ -0.09
Ercc3P49135 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Gm9996-201ENSMUST00000070359 913 ntBASIC14.48□□□□□ -0.09
Ercc3P49135 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.48□□□□□ -0.09
Ercc3P49135 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Ercc3P49135 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ercc3P49135 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.48□□□□□ -0.09
Ercc3P49135 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc3P49135 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ercc3P49135 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.47□□□□□ -0.09
Ercc3P49135 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.47□□□□□ -0.09
Ercc3P49135 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.47□□□□□ -0.09
Ercc3P49135 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.47□□□□□ -0.09
Ercc3P49135 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.47□□□□□ -0.09
Ercc3P49135 Gm19994-201ENSMUST00000217086 586 ntBASIC14.47□□□□□ -0.09
Ercc3P49135 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ercc3P49135 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.47□□□□□ -0.09
Ercc3P49135 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ercc3P49135 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Ercc3P49135 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Ercc3P49135 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ercc3P49135 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.47□□□□□ -0.09
Ercc3P49135 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Ercc3P49135 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ercc3P49135 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc3P49135 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ercc3P49135 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ercc3P49135 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ercc3P49135 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.46□□□□□ -0.09
Ercc3P49135 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.46□□□□□ -0.09
Ercc3P49135 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.46□□□□□ -0.09
Ercc3P49135 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.46□□□□□ -0.09
Ercc3P49135 Gm15276-201ENSMUST00000145953 498 ntBASIC14.46□□□□□ -0.09
Ercc3P49135 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.46□□□□□ -0.09
Ercc3P49135 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.46□□□□□ -0.09
Ercc3P49135 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.46□□□□□ -0.09
Ercc3P49135 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.46□□□□□ -0.09
Ercc3P49135 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.46□□□□□ -0.09
Ercc3P49135 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.46□□□□□ -0.09
Ercc3P49135 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ercc3P49135 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc3P49135 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms