Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm13315-201ENSMUST00000120376 991 ntBASIC11.4□□□□□ -0.58
Sox2P48432 Gm9083-201ENSMUST00000120423 819 ntBASIC11.4□□□□□ -0.58
Sox2P48432 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Gm12091-201ENSMUST00000146791 830 ntBASIC11.4□□□□□ -0.58
Sox2P48432 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.4□□□□□ -0.58
Sox2P48432 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox2P48432 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Gm18018-201ENSMUST00000198273 408 ntBASIC11.4□□□□□ -0.58
Sox2P48432 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.4□□□□□ -0.58
Sox2P48432 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox2P48432 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.4□□□□□ -0.58
Sox2P48432 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sox2P48432 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.4□□□□□ -0.58
Sox2P48432 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sox2P48432 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox2P48432 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox2P48432 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox2P48432 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox2P48432 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.4□□□□□ -0.59
Sox2P48432 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox2P48432 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Sox2P48432 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sox2P48432 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.4□□□□□ -0.59
Sox2P48432 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Sox2P48432 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox2P48432 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.4□□□□□ -0.59
Sox2P48432 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox2P48432 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.4□□□□□ -0.59
Sox2P48432 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox2P48432 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Sox2P48432 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.39□□□□□ -0.59
Sox2P48432 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.39□□□□□ -0.59
Sox2P48432 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.39□□□□□ -0.59
Sox2P48432 Gm23119-201ENSMUST00000158610 140 ntBASIC11.39□□□□□ -0.59
Sox2P48432 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.39□□□□□ -0.59
Sox2P48432 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.39□□□□□ -0.59
Sox2P48432 Gm6007-201ENSMUST00000208170 823 ntBASIC11.39□□□□□ -0.59
Sox2P48432 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Sox2P48432 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.39□□□□□ -0.59
Sox2P48432 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox2P48432 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox2P48432 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Sox2P48432 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.39□□□□□ -0.59
Sox2P48432 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox2P48432 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.38□□□□□ -0.59
Sox2P48432 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox2P48432 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sox2P48432 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sox2P48432 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox2P48432 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Sox2P48432 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms