Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.58□□□□□ -0.4
HttP42859 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HttP42859 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HttP42859 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HttP42859 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.57□□□□□ -0.4
HttP42859 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC12.57□□□□□ -0.4
HttP42859 Gm38103-201ENSMUST00000191707 864 ntBASIC12.57□□□□□ -0.4
HttP42859 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HttP42859 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
HttP42859 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
HttP42859 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.57□□□□□ -0.4
HttP42859 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
HttP42859 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.57□□□□□ -0.4
HttP42859 Gm5976-201ENSMUST00000180794 996 ntBASIC12.57□□□□□ -0.4
HttP42859 Mir6359-201ENSMUST00000183668 81 ntBASIC12.57□□□□□ -0.4
HttP42859 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC12.57□□□□□ -0.4
HttP42859 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
HttP42859 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
HttP42859 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.57□□□□□ -0.4
HttP42859 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HttP42859 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HttP42859 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.57□□□□□ -0.4
HttP42859 Gm8824-201ENSMUST00000182962 990 ntBASIC12.57□□□□□ -0.4
HttP42859 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.57□□□□□ -0.4
HttP42859 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
HttP42859 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.57□□□□□ -0.4
HttP42859 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HttP42859 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Gm23132-201ENSMUST00000104254 132 ntBASIC12.56□□□□□ -0.4
HttP42859 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.56□□□□□ -0.4
HttP42859 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.56□□□□□ -0.4
HttP42859 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.56□□□□□ -0.4
HttP42859 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.56□□□□□ -0.4
HttP42859 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HttP42859 Mir6934-201ENSMUST00000183965 62 ntBASIC12.56□□□□□ -0.4
HttP42859 Gm43866-201ENSMUST00000203894 839 ntBASIC12.56□□□□□ -0.4
HttP42859 Capsl-202ENSMUST00000226688 739 ntBASIC12.56□□□□□ -0.4
HttP42859 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.56□□□□□ -0.4
HttP42859 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HttP42859 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Gm6216-201ENSMUST00000182390 687 ntBASIC12.55□□□□□ -0.4
HttP42859 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12.55□□□□□ -0.4
HttP42859 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.55□□□□□ -0.4
HttP42859 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
HttP42859 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
HttP42859 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Gm11540-201ENSMUST00000117457 780 ntBASIC12.55□□□□□ -0.4
HttP42859 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Gm12009-201ENSMUST00000121361 1100 ntBASIC12.55□□□□□ -0.4
HttP42859 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms