Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Rfc1P35601 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rfc1P35601 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.85□□□□□ -0.35
Rfc1P35601 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfc1P35601 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rfc1P35601 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.85□□□□□ -0.35
Rfc1P35601 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.85□□□□□ -0.35
Rfc1P35601 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Gm18018-201ENSMUST00000198273 408 ntBASIC12.85□□□□□ -0.35
Rfc1P35601 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.85□□□□□ -0.35
Rfc1P35601 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfc1P35601 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfc1P35601 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rfc1P35601 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfc1P35601 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfc1P35601 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rfc1P35601 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rfc1P35601 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.85□□□□□ -0.35
Rfc1P35601 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rfc1P35601 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfc1P35601 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Rfc1P35601 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rfc1P35601 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Rfc1P35601 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.84□□□□□ -0.35
Rfc1P35601 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfc1P35601 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Gm12291-201ENSMUST00000121627 311 ntBASIC12.84□□□□□ -0.35
Rfc1P35601 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.84□□□□□ -0.35
Rfc1P35601 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.84□□□□□ -0.35
Rfc1P35601 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Gm27701-201ENSMUST00000184498 110 ntBASIC12.84□□□□□ -0.35
Rfc1P35601 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.84□□□□□ -0.35
Rfc1P35601 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfc1P35601 Gm18473-201ENSMUST00000220543 868 ntBASIC12.84□□□□□ -0.35
Rfc1P35601 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.84□□□□□ -0.35
Rfc1P35601 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.84□□□□□ -0.35
Rfc1P35601 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rfc1P35601 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfc1P35601 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rfc1P35601 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rfc1P35601 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfc1P35601 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rfc1P35601 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rfc1P35601 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rfc1P35601 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfc1P35601 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfc1P35601 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfc1P35601 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfc1P35601 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.83□□□□□ -0.36
Rfc1P35601 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfc1P35601 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfc1P35601 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfc1P35601 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rfc1P35601 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rfc1P35601 Gm12928-201ENSMUST00000117115 573 ntBASIC12.83□□□□□ -0.36
Rfc1P35601 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms