Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm15566-201ENSMUST00000121130 590 ntBASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm9645-201ENSMUST00000197131 792 ntBASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm43186-201ENSMUST00000198130 824 ntBASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm42657-201ENSMUST00000201746 211 ntBASIC11.26□□□□□ -0.61
Sftpa1P35242 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Sftpa1P35242 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.26□□□□□ -0.61
Sftpa1P35242 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sftpa1P35242 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sftpa1P35242 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Sftpa1P35242 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.25□□□□□ -0.61
Sftpa1P35242 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Gm11511-201ENSMUST00000118146 540 ntBASIC11.25□□□□□ -0.61
Sftpa1P35242 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.25□□□□□ -0.61
Sftpa1P35242 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.25□□□□□ -0.61
Sftpa1P35242 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.25□□□□□ -0.61
Sftpa1P35242 Gm23218-201ENSMUST00000158124 276 ntBASIC11.25□□□□□ -0.61
Sftpa1P35242 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.25□□□□□ -0.61
Sftpa1P35242 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.25□□□□□ -0.61
Sftpa1P35242 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.25□□□□□ -0.61
Sftpa1P35242 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.25□□□□□ -0.61
Sftpa1P35242 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.25□□□□□ -0.61
Sftpa1P35242 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.25□□□□□ -0.61
Sftpa1P35242 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Sftpa1P35242 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sftpa1P35242 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sftpa1P35242 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.25□□□□□ -0.61
Sftpa1P35242 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sftpa1P35242 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms