Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Slc6a1P31648 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Slc6a1P31648 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
Slc6a1P31648 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.5□□□□□ -0.73
Slc6a1P31648 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Gm5035-201ENSMUST00000215581 927 ntBASIC10.5□□□□□ -0.73
Slc6a1P31648 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.5□□□□□ -0.73
Slc6a1P31648 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc6a1P31648 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.5□□□□□ -0.73
Slc6a1P31648 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.5□□□□□ -0.73
Slc6a1P31648 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.49□□□□□ -0.73
Slc6a1P31648 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Gm12928-201ENSMUST00000117115 573 ntBASIC10.49□□□□□ -0.73
Slc6a1P31648 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.49□□□□□ -0.73
Slc6a1P31648 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.49□□□□□ -0.73
Slc6a1P31648 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Gm6266-201ENSMUST00000203844 806 ntBASIC10.49□□□□□ -0.73
Slc6a1P31648 Gm7287-201ENSMUST00000205267 602 ntBASIC10.49□□□□□ -0.73
Slc6a1P31648 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Gm8463-201ENSMUST00000208573 613 ntBASIC10.49□□□□□ -0.73
Slc6a1P31648 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Gm25857-201ENSMUST00000082788 129 ntBASIC10.49□□□□□ -0.73
Slc6a1P31648 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc6a1P31648 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc6a1P31648 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms