Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Nedd8P29595 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.22□□□□□ -0.61
Nedd8P29595 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.22□□□□□ -0.61
Nedd8P29595 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.22□□□□□ -0.61
Nedd8P29595 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.22□□□□□ -0.61
Nedd8P29595 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.22□□□□□ -0.61
Nedd8P29595 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.22□□□□□ -0.61
Nedd8P29595 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nedd8P29595 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Nedd8P29595 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nedd8P29595 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Nedd8P29595 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.21□□□□□ -0.61
Nedd8P29595 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.21□□□□□ -0.61
Nedd8P29595 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.21□□□□□ -0.61
Nedd8P29595 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.21□□□□□ -0.61
Nedd8P29595 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Gm14704-201ENSMUST00000120300 874 ntBASIC11.21□□□□□ -0.61
Nedd8P29595 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.21□□□□□ -0.61
Nedd8P29595 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.21□□□□□ -0.61
Nedd8P29595 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.21□□□□□ -0.61
Nedd8P29595 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.21□□□□□ -0.61
Nedd8P29595 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.21□□□□□ -0.61
Nedd8P29595 Gm4034-201ENSMUST00000187674 480 ntBASIC11.21□□□□□ -0.61
Nedd8P29595 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Nedd8P29595 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nedd8P29595 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.21□□□□□ -0.61
Nedd8P29595 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nedd8P29595 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nedd8P29595 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.21□□□□□ -0.62
Nedd8P29595 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Nedd8P29595 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Nedd8P29595 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nedd8P29595 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nedd8P29595 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.21□□□□□ -0.62
Nedd8P29595 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Nedd8P29595 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nedd8P29595 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nedd8P29595 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Nedd8P29595 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.2□□□□□ -0.62
Nedd8P29595 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nedd8P29595 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nedd8P29595 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nedd8P29595 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms