Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm9062-201ENSMUST00000117712 727 ntBASIC13.36□□□□□ -0.27
Pde6bP23440 Gm15711-201ENSMUST00000118889 535 ntBASIC13.36□□□□□ -0.27
Pde6bP23440 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.36□□□□□ -0.27
Pde6bP23440 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Pde6bP23440 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Pde6bP23440 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.36□□□□□ -0.27
Pde6bP23440 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.36□□□□□ -0.27
Pde6bP23440 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.36□□□□□ -0.27
Pde6bP23440 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.36□□□□□ -0.27
Pde6bP23440 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.36□□□□□ -0.27
Pde6bP23440 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.36□□□□□ -0.27
Pde6bP23440 Spcs1-203ENSMUST00000226374 592 ntBASIC13.36□□□□□ -0.27
Pde6bP23440 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.36□□□□□ -0.27
Pde6bP23440 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Pde6bP23440 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pde6bP23440 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.36□□□□□ -0.27
Pde6bP23440 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6bP23440 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pde6bP23440 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pde6bP23440 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.35□□□□□ -0.27
Pde6bP23440 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pde6bP23440 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.35□□□□□ -0.27
Pde6bP23440 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pde6bP23440 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pde6bP23440 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Gm12616-201ENSMUST00000118594 382 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Gm12380-201ENSMUST00000119012 544 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.35□□□□□ -0.27
Pde6bP23440 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.35□□□□□ -0.27
Pde6bP23440 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Gm12624-201ENSMUST00000177615 382 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Gm12621-201ENSMUST00000177760 382 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Gm12615-201ENSMUST00000177970 382 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Gm12622-201ENSMUST00000177975 382 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Gm12627-201ENSMUST00000178412 382 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Gm12625-201ENSMUST00000179122 382 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Gm12614-201ENSMUST00000179586 382 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Gm12613-201ENSMUST00000180323 382 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.35□□□□□ -0.27
Pde6bP23440 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.35□□□□□ -0.27
Pde6bP23440 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Pde6bP23440 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.35□□□□□ -0.27
Pde6bP23440 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Pde6bP23440 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pde6bP23440 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.35□□□□□ -0.27
Pde6bP23440 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.35□□□□□ -0.27
Pde6bP23440 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pde6bP23440 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pde6bP23440 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pde6bP23440 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pde6bP23440 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.34□□□□□ -0.27
Pde6bP23440 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pde6bP23440 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pde6bP23440 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.34□□□□□ -0.27
Pde6bP23440 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms