Protein–RNA interactions for Protein: P21841

Sftpc, Pulmonary surfactant-associated protein C, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpcP21841 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SftpcP21841 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SftpcP21841 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SftpcP21841 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SftpcP21841 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
SftpcP21841 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SftpcP21841 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SftpcP21841 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.02□□□□□ -0.64
SftpcP21841 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SftpcP21841 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.02□□□□□ -0.65
SftpcP21841 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Mir874-201ENSMUST00000104769 76 ntBASIC11.02□□□□□ -0.65
SftpcP21841 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Gm13736-201ENSMUST00000119272 253 ntBASIC11.02□□□□□ -0.65
SftpcP21841 Gm11667-201ENSMUST00000119828 486 ntBASIC11.02□□□□□ -0.65
SftpcP21841 Gm12029-201ENSMUST00000120073 832 ntBASIC11.02□□□□□ -0.65
SftpcP21841 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.02□□□□□ -0.65
SftpcP21841 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.02□□□□□ -0.65
SftpcP21841 Gm38092-201ENSMUST00000195600 653 ntBASIC11.02□□□□□ -0.65
SftpcP21841 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.02□□□□□ -0.65
SftpcP21841 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.02□□□□□ -0.65
SftpcP21841 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.02□□□□□ -0.65
SftpcP21841 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.02□□□□□ -0.65
SftpcP21841 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SftpcP21841 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SftpcP21841 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.02□□□□□ -0.65
SftpcP21841 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.02□□□□□ -0.65
SftpcP21841 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.02□□□□□ -0.65
SftpcP21841 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SftpcP21841 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.01□□□□□ -0.65
SftpcP21841 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.01□□□□□ -0.65
SftpcP21841 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SftpcP21841 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SftpcP21841 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.01□□□□□ -0.65
SftpcP21841 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
SftpcP21841 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
SftpcP21841 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.01□□□□□ -0.65
SftpcP21841 Gm12795-201ENSMUST00000117594 539 ntBASIC11.01□□□□□ -0.65
SftpcP21841 Gm8566-201ENSMUST00000120174 465 ntBASIC11.01□□□□□ -0.65
SftpcP21841 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.01□□□□□ -0.65
SftpcP21841 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.01□□□□□ -0.65
SftpcP21841 Gm29155-201ENSMUST00000185910 269 ntBASIC11.01□□□□□ -0.65
SftpcP21841 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.01□□□□□ -0.65
SftpcP21841 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.01□□□□□ -0.65
SftpcP21841 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.01□□□□□ -0.65
SftpcP21841 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.01□□□□□ -0.65
SftpcP21841 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SftpcP21841 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SftpcP21841 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
SftpcP21841 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms