Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fv4P11370 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fv4P11370 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fv4P11370 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fv4P11370 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fv4P11370 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fv4P11370 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Fv4P11370 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fv4P11370 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.77□□□□□ -0.52
Fv4P11370 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.77□□□□□ -0.53
Fv4P11370 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.77□□□□□ -0.53
Fv4P11370 Gm10434-201ENSMUST00000101158 471 ntBASIC11.77□□□□□ -0.53
Fv4P11370 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Fv4P11370 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Fv4P11370 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.77□□□□□ -0.53
Fv4P11370 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.77□□□□□ -0.53
Fv4P11370 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.77□□□□□ -0.53
Fv4P11370 Gm28882-201ENSMUST00000185504 314 ntBASIC11.77□□□□□ -0.53
Fv4P11370 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.77□□□□□ -0.53
Fv4P11370 Gm18711-201ENSMUST00000199341 750 ntBASIC11.77□□□□□ -0.53
Fv4P11370 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.77□□□□□ -0.53
Fv4P11370 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.77□□□□□ -0.53
Fv4P11370 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Fv4P11370 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.77□□□□□ -0.53
Fv4P11370 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Fv4P11370 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fv4P11370 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fv4P11370 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fv4P11370 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fv4P11370 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.76□□□□□ -0.53
Fv4P11370 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Fv4P11370 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.76□□□□□ -0.53
Fv4P11370 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.76□□□□□ -0.53
Fv4P11370 Gm22018-201ENSMUST00000104357 131 ntBASIC11.76□□□□□ -0.53
Fv4P11370 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fv4P11370 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fv4P11370 Gm15824-201ENSMUST00000119516 955 ntBASIC11.76□□□□□ -0.53
Fv4P11370 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Gm25043-201ENSMUST00000158604 212 ntBASIC11.76□□□□□ -0.53
Fv4P11370 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Fv4P11370 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.76□□□□□ -0.53
Fv4P11370 Gm2546-201ENSMUST00000182630 991 ntBASIC11.76□□□□□ -0.53
Fv4P11370 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.76□□□□□ -0.53
Fv4P11370 Gm5370-201ENSMUST00000187187 574 ntBASIC11.76□□□□□ -0.53
Fv4P11370 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.76□□□□□ -0.53
Fv4P11370 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Fv4P11370 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.76□□□□□ -0.53
Fv4P11370 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fv4P11370 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Fv4P11370 Paupar-201ENSMUST00000194826 3482 ntBASIC11.76□□□□□ -0.53
Fv4P11370 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.76□□□□□ -0.53
Fv4P11370 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.76□□□□□ -0.53
Fv4P11370 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.75□□□□□ -0.53
Fv4P11370 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Fv4P11370 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.75□□□□□ -0.53
Fv4P11370 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms