Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm44958-201ENSMUST00000203734 736 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 CT025526.1-201ENSMUST00000217327 267 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 AC116589.4-201ENSMUST00000222390 216 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 AC173482.2-201ENSMUST00000224044 750 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm14109-201ENSMUST00000118814 309 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm8885-201ENSMUST00000189382 598 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 AA914427-201ENSMUST00000193194 1166 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm43952-201ENSMUST00000203765 751 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm44967-201ENSMUST00000207047 631 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gm9257-201ENSMUST00000221254 232 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms