Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Gm12799-201ENSMUST00000118151 2560 ntBASIC8.34□□□□□ -1.07
Smim1P0C8K7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smim1P0C8K7 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.08
Smim1P0C8K7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Smim1P0C8K7 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Smim1P0C8K7 Gm9035-201ENSMUST00000218318 1697 ntBASIC8.34□□□□□ -1.08
Smim1P0C8K7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm6992-201ENSMUST00000217973 1607 ntBASIC8.33□□□□□ -1.08
Smim1P0C8K7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Rab3c-202ENSMUST00000223922 2398 ntBASIC8.33□□□□□ -1.08
Smim1P0C8K7 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm14140-201ENSMUST00000119999 995 ntBASIC8.33□□□□□ -1.08
Smim1P0C8K7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm5740-201ENSMUST00000211003 1857 ntBASIC8.33□□□□□ -1.08
Smim1P0C8K7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm807-202ENSMUST00000224929 408 ntBASIC8.33□□□□□ -1.08
Smim1P0C8K7 Shd-206ENSMUST00000225145 998 ntBASIC8.33□□□□□ -1.08
Smim1P0C8K7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm8522-201ENSMUST00000118416 1929 ntBASIC8.33□□□□□ -1.08
Smim1P0C8K7 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smim1P0C8K7 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smim1P0C8K7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms