Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.54□□□□□ -0.56
ApoeP08226 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.54□□□□□ -0.56
ApoeP08226 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
ApoeP08226 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
ApoeP08226 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
ApoeP08226 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ApoeP08226 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ApoeP08226 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.54□□□□□ -0.56
ApoeP08226 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.54□□□□□ -0.56
ApoeP08226 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.54□□□□□ -0.56
ApoeP08226 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.53□□□□□ -0.56
ApoeP08226 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.53□□□□□ -0.56
ApoeP08226 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.53□□□□□ -0.56
ApoeP08226 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Gm13315-201ENSMUST00000120376 991 ntBASIC11.53□□□□□ -0.56
ApoeP08226 Gm14057-201ENSMUST00000120631 482 ntBASIC11.53□□□□□ -0.56
ApoeP08226 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
ApoeP08226 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.53□□□□□ -0.56
ApoeP08226 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.53□□□□□ -0.56
ApoeP08226 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.53□□□□□ -0.56
ApoeP08226 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.53□□□□□ -0.56
ApoeP08226 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
ApoeP08226 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
ApoeP08226 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
ApoeP08226 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
ApoeP08226 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.53□□□□□ -0.56
ApoeP08226 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.53□□□□□ -0.56
ApoeP08226 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ApoeP08226 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.52□□□□□ -0.56
ApoeP08226 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
ApoeP08226 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.52□□□□□ -0.56
ApoeP08226 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
ApoeP08226 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.52□□□□□ -0.57
ApoeP08226 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.52□□□□□ -0.57
ApoeP08226 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
ApoeP08226 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Gm12859-201ENSMUST00000117834 427 ntBASIC11.52□□□□□ -0.57
ApoeP08226 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.52□□□□□ -0.57
ApoeP08226 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.52□□□□□ -0.57
ApoeP08226 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ApoeP08226 Gm8018-201ENSMUST00000173536 789 ntBASIC11.52□□□□□ -0.57
ApoeP08226 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms