Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.01□□□□□ -0.49
Hoxa4P06798 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Gm2383-201ENSMUST00000181461 807 ntBASIC12.01□□□□□ -0.49
Hoxa4P06798 Gm8343-201ENSMUST00000182705 994 ntBASIC12.01□□□□□ -0.49
Hoxa4P06798 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.01□□□□□ -0.49
Hoxa4P06798 Gm8956-201ENSMUST00000203939 825 ntBASIC12.01□□□□□ -0.49
Hoxa4P06798 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.01□□□□□ -0.49
Hoxa4P06798 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.01□□□□□ -0.49
Hoxa4P06798 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.01□□□□□ -0.49
Hoxa4P06798 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.01□□□□□ -0.49
Hoxa4P06798 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12□□□□□ -0.49
Hoxa4P06798 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hoxa4P06798 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12□□□□□ -0.49
Hoxa4P06798 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Gm29199-201ENSMUST00000187766 775 ntBASIC12□□□□□ -0.49
Hoxa4P06798 Gm7003-201ENSMUST00000195089 312 ntBASIC12□□□□□ -0.49
Hoxa4P06798 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12□□□□□ -0.49
Hoxa4P06798 Gm18056-201ENSMUST00000207670 568 ntBASIC12□□□□□ -0.49
Hoxa4P06798 Gm18061-201ENSMUST00000208350 562 ntBASIC12□□□□□ -0.49
Hoxa4P06798 Gm18063-201ENSMUST00000208529 568 ntBASIC12□□□□□ -0.49
Hoxa4P06798 Gm18052-201ENSMUST00000208750 559 ntBASIC12□□□□□ -0.49
Hoxa4P06798 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12□□□□□ -0.49
Hoxa4P06798 Gm270-201ENSMUST00000223010 976 ntBASIC12□□□□□ -0.49
Hoxa4P06798 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hoxa4P06798 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12□□□□□ -0.49
Hoxa4P06798 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12□□□□□ -0.49
Hoxa4P06798 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Hoxa4P06798 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12□□□□□ -0.49
Hoxa4P06798 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12□□□□□ -0.49
Hoxa4P06798 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12□□□□□ -0.49
Hoxa4P06798 Gm5847-201ENSMUST00000178959 1595 ntBASIC12□□□□□ -0.49
Hoxa4P06798 Gm27177-202ENSMUST00000183514 2703 ntBASIC12□□□□□ -0.49
Hoxa4P06798 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa4P06798 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hoxa4P06798 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa4P06798 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.99□□□□□ -0.49
Hoxa4P06798 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Hoxa4P06798 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.99□□□□□ -0.49
Hoxa4P06798 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa4P06798 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa4P06798 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa4P06798 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa4P06798 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa4P06798 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa4P06798 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa4P06798 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.99□□□□□ -0.49
Hoxa4P06798 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa4P06798 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms