Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.37□□□□□ -0.43
PdgfrbP05622 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Gm28745-201ENSMUST00000190069 305 ntBASIC12.37□□□□□ -0.43
PdgfrbP05622 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.37□□□□□ -0.43
PdgfrbP05622 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.37□□□□□ -0.43
PdgfrbP05622 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.37□□□□□ -0.43
PdgfrbP05622 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.37□□□□□ -0.43
PdgfrbP05622 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.37□□□□□ -0.43
PdgfrbP05622 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.36□□□□□ -0.43
PdgfrbP05622 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.36□□□□□ -0.43
PdgfrbP05622 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.36□□□□□ -0.43
PdgfrbP05622 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.36□□□□□ -0.43
PdgfrbP05622 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.36□□□□□ -0.43
PdgfrbP05622 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.36□□□□□ -0.43
PdgfrbP05622 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.36□□□□□ -0.43
PdgfrbP05622 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Gm9899-201ENSMUST00000065519 555 ntBASIC12.36□□□□□ -0.43
PdgfrbP05622 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Gm26226-201ENSMUST00000082509 116 ntBASIC12.36□□□□□ -0.43
PdgfrbP05622 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
PdgfrbP05622 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfrbP05622 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PdgfrbP05622 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PdgfrbP05622 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PdgfrbP05622 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PdgfrbP05622 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PdgfrbP05622 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
PdgfrbP05622 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PdgfrbP05622 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms