Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
CfdP03953 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CfdP03953 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CfdP03953 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CfdP03953 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.17□□□□□ -0.78
CfdP03953 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.17□□□□□ -0.78
CfdP03953 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.17□□□□□ -0.78
CfdP03953 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CfdP03953 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.17□□□□□ -0.78
CfdP03953 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CfdP03953 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.17□□□□□ -0.78
CfdP03953 Gm12036-201ENSMUST00000120008 530 ntBASIC10.17□□□□□ -0.78
CfdP03953 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.17□□□□□ -0.78
CfdP03953 Proscos-202ENSMUST00000178990 666 ntBASIC10.17□□□□□ -0.78
CfdP03953 Gm43575-201ENSMUST00000196420 516 ntBASIC10.17□□□□□ -0.78
CfdP03953 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.17□□□□□ -0.78
CfdP03953 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.17□□□□□ -0.78
CfdP03953 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.17□□□□□ -0.78
CfdP03953 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
CfdP03953 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.17□□□□□ -0.78
CfdP03953 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
CfdP03953 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CfdP03953 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.16□□□□□ -0.78
CfdP03953 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.16□□□□□ -0.78
CfdP03953 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CfdP03953 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CfdP03953 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.16□□□□□ -0.78
CfdP03953 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Gm12928-201ENSMUST00000117115 573 ntBASIC10.16□□□□□ -0.78
CfdP03953 Gm9083-201ENSMUST00000120423 819 ntBASIC10.16□□□□□ -0.78
CfdP03953 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.16□□□□□ -0.78
CfdP03953 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.16□□□□□ -0.78
CfdP03953 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
CfdP03953 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.16□□□□□ -0.78
CfdP03953 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
CfdP03953 Gm28631-201ENSMUST00000190740 334 ntBASIC10.16□□□□□ -0.78
CfdP03953 Gm37922-201ENSMUST00000195596 455 ntBASIC10.16□□□□□ -0.78
CfdP03953 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.16□□□□□ -0.78
CfdP03953 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.16□□□□□ -0.78
CfdP03953 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.16□□□□□ -0.78
CfdP03953 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
CfdP03953 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CfdP03953 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.16□□□□□ -0.78
CfdP03953 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CfdP03953 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
CfdP03953 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CfdP03953 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms