Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sp1O89090 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sp1O89090 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Sp1O89090 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Sp1O89090 Gm13035-201ENSMUST00000117496 342 ntBASIC12.28□□□□□ -0.44
Sp1O89090 Gm15610-201ENSMUST00000120584 195 ntBASIC12.28□□□□□ -0.44
Sp1O89090 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.28□□□□□ -0.44
Sp1O89090 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.28□□□□□ -0.44
Sp1O89090 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.28□□□□□ -0.44
Sp1O89090 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.28□□□□□ -0.44
Sp1O89090 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.28□□□□□ -0.44
Sp1O89090 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.28□□□□□ -0.44
Sp1O89090 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.28□□□□□ -0.44
Sp1O89090 Gm17931-201ENSMUST00000208132 634 ntBASIC12.28□□□□□ -0.44
Sp1O89090 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.28□□□□□ -0.44
Sp1O89090 Gm9797-202ENSMUST00000218003 294 ntBASIC12.28□□□□□ -0.44
Sp1O89090 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.28□□□□□ -0.44
Sp1O89090 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.28□□□□□ -0.44
Sp1O89090 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.28□□□□□ -0.44
Sp1O89090 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.28□□□□□ -0.44
Sp1O89090 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.28□□□□□ -0.44
Sp1O89090 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sp1O89090 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp1O89090 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Sp1O89090 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sp1O89090 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp1O89090 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp1O89090 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sp1O89090 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp1O89090 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp1O89090 Gm14058-201ENSMUST00000116082 735 ntBASIC12.27□□□□□ -0.45
Sp1O89090 Gm12857-201ENSMUST00000117678 592 ntBASIC12.27□□□□□ -0.45
Sp1O89090 Gm12501-201ENSMUST00000119163 529 ntBASIC12.27□□□□□ -0.45
Sp1O89090 Gm15004-201ENSMUST00000119192 630 ntBASIC12.27□□□□□ -0.45
Sp1O89090 Gm23699-201ENSMUST00000158835 135 ntBASIC12.27□□□□□ -0.45
Sp1O89090 Gm20426-201ENSMUST00000173657 440 ntBASIC12.27□□□□□ -0.45
Sp1O89090 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.27□□□□□ -0.45
Sp1O89090 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.27□□□□□ -0.45
Sp1O89090 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.27□□□□□ -0.45
Sp1O89090 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.27□□□□□ -0.45
Sp1O89090 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.27□□□□□ -0.45
Sp1O89090 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp1O89090 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.27□□□□□ -0.45
Sp1O89090 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp1O89090 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sp1O89090 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.27□□□□□ -0.45
Sp1O89090 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sp1O89090 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp1O89090 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sp1O89090 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Sp1O89090 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sp1O89090 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp1O89090 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp1O89090 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.26□□□□□ -0.45
Sp1O89090 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp1O89090 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp1O89090 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp1O89090 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms