Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.59□□□□□ -0.39
Syn1O88935 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Syn1O88935 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Syn1O88935 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.59□□□□□ -0.39
Syn1O88935 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.59□□□□□ -0.39
Syn1O88935 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Gm8531-201ENSMUST00000188319 893 ntBASIC12.59□□□□□ -0.39
Syn1O88935 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.59□□□□□ -0.39
Syn1O88935 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Syn1O88935 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.59□□□□□ -0.39
Syn1O88935 Grk6-205ENSMUST00000224653 2976 ntBASIC12.59□□□□□ -0.39
Syn1O88935 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Syn1O88935 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Syn1O88935 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syn1O88935 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syn1O88935 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syn1O88935 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syn1O88935 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syn1O88935 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Syn1O88935 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Syn1O88935 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.58□□□□□ -0.4
Syn1O88935 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Syn1O88935 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.58□□□□□ -0.4
Syn1O88935 Gm29410-201ENSMUST00000188383 694 ntBASIC12.58□□□□□ -0.4
Syn1O88935 Gm5100-201ENSMUST00000195631 589 ntBASIC12.58□□□□□ -0.4
Syn1O88935 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.58□□□□□ -0.4
Syn1O88935 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.58□□□□□ -0.4
Syn1O88935 Gm45500-201ENSMUST00000211676 803 ntBASIC12.58□□□□□ -0.4
Syn1O88935 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.58□□□□□ -0.4
Syn1O88935 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.58□□□□□ -0.4
Syn1O88935 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.58□□□□□ -0.4
Syn1O88935 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.58□□□□□ -0.4
Syn1O88935 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.58□□□□□ -0.4
Syn1O88935 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.58□□□□□ -0.4
Syn1O88935 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Syn1O88935 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Syn1O88935 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Syn1O88935 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Syn1O88935 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Syn1O88935 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Gm24934-201ENSMUST00000103764 111 ntBASIC12.57□□□□□ -0.4
Syn1O88935 Gm12218-201ENSMUST00000117666 399 ntBASIC12.57□□□□□ -0.4
Syn1O88935 Gm11663-201ENSMUST00000117888 290 ntBASIC12.57□□□□□ -0.4
Syn1O88935 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Gm24398-201ENSMUST00000157870 109 ntBASIC12.57□□□□□ -0.4
Syn1O88935 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Syn1O88935 Gm8343-201ENSMUST00000182705 994 ntBASIC12.57□□□□□ -0.4
Syn1O88935 Gm4654-201ENSMUST00000183305 982 ntBASIC12.57□□□□□ -0.4
Syn1O88935 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syn1O88935 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms