Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Col5a1O88207 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col5a1O88207 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col5a1O88207 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col5a1O88207 Gm22920-201ENSMUST00000102175 109 ntBASIC10.86□□□□□ -0.67
Col5a1O88207 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.86□□□□□ -0.67
Col5a1O88207 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Gm24844-201ENSMUST00000158679 127 ntBASIC10.86□□□□□ -0.67
Col5a1O88207 Gm9136-201ENSMUST00000193368 454 ntBASIC10.86□□□□□ -0.67
Col5a1O88207 Gm42433-201ENSMUST00000196806 940 ntBASIC10.86□□□□□ -0.67
Col5a1O88207 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.86□□□□□ -0.67
Col5a1O88207 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col5a1O88207 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Col5a1O88207 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC10.85□□□□□ -0.67
Col5a1O88207 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Col5a1O88207 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.85□□□□□ -0.67
Col5a1O88207 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Gm15003-201ENSMUST00000118884 446 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Gm8723-201ENSMUST00000166076 820 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 Gm8701-201ENSMUST00000169259 874 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 Gm25998-201ENSMUST00000175397 53 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.85□□□□□ -0.67
Col5a1O88207 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Col5a1O88207 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col5a1O88207 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.85□□□□□ -0.67
Col5a1O88207 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Col5a1O88207 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Col5a1O88207 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.84□□□□□ -0.67
Col5a1O88207 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Col5a1O88207 Mir6407-201ENSMUST00000184510 101 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.84□□□□□ -0.67
Col5a1O88207 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Col5a1O88207 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.84□□□□□ -0.67
Col5a1O88207 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC10.84□□□□□ -0.67
Col5a1O88207 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.84□□□□□ -0.67
Col5a1O88207 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Col5a1O88207 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.84□□□□□ -0.67
Col5a1O88207 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms