Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC15.52■□□□□ 0.07
Ubr1O70481 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC15.52■□□□□ 0.07
Ubr1O70481 Gm8197-202ENSMUST00000193422 934 ntBASIC15.52■□□□□ 0.07
Ubr1O70481 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.52■□□□□ 0.07
Ubr1O70481 Gm45592-201ENSMUST00000209605 1043 ntBASIC15.52■□□□□ 0.07
Ubr1O70481 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC15.52■□□□□ 0.07
Ubr1O70481 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 Gm4811-201ENSMUST00000220879 1220 ntBASIC15.52■□□□□ 0.07
Ubr1O70481 Gm6722-201ENSMUST00000221586 390 ntBASIC15.52■□□□□ 0.07
Ubr1O70481 CT010506.1-201ENSMUST00000223673 349 ntBASIC15.52■□□□□ 0.07
Ubr1O70481 Gm9873-201ENSMUST00000063891 1097 ntBASIC15.52■□□□□ 0.07
Ubr1O70481 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ubr1O70481 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ubr1O70481 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Ubr1O70481 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Gm36970-201ENSMUST00000193688 1859 ntBASIC15.51■□□□□ 0.07
Ubr1O70481 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
Ubr1O70481 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.51■□□□□ 0.07
Ubr1O70481 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ubr1O70481 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Gm14892-201ENSMUST00000117636 267 ntBASIC15.51■□□□□ 0.07
Ubr1O70481 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC15.51■□□□□ 0.07
Ubr1O70481 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.51■□□□□ 0.07
Ubr1O70481 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC15.51■□□□□ 0.07
Ubr1O70481 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.51■□□□□ 0.07
Ubr1O70481 Gm42816-201ENSMUST00000198433 325 ntBASIC15.51■□□□□ 0.07
Ubr1O70481 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC15.51■□□□□ 0.07
Ubr1O70481 CT573047.1-201ENSMUST00000223652 851 ntBASIC15.51■□□□□ 0.07
Ubr1O70481 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ubr1O70481 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ubr1O70481 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubr1O70481 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubr1O70481 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
Ubr1O70481 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubr1O70481 Gm11340-201ENSMUST00000119226 412 ntBASIC15.5■□□□□ 0.07
Ubr1O70481 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC15.5■□□□□ 0.07
Ubr1O70481 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.5■□□□□ 0.07
Ubr1O70481 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Ubr1O70481 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC15.5■□□□□ 0.07
Ubr1O70481 Gm5996-201ENSMUST00000211110 718 ntBASIC15.5■□□□□ 0.07
Ubr1O70481 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.5■□□□□ 0.07
Ubr1O70481 Gm23680-201ENSMUST00000083162 164 ntBASIC15.5■□□□□ 0.07
Ubr1O70481 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubr1O70481 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubr1O70481 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ubr1O70481 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ubr1O70481 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubr1O70481 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubr1O70481 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.5■□□□□ 0.07
Ubr1O70481 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ubr1O70481 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ubr1O70481 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubr1O70481 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ubr1O70481 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.5■□□□□ 0.07
Ubr1O70481 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ubr1O70481 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Gm25880-201ENSMUST00000104331 132 ntBASIC15.49■□□□□ 0.07
Ubr1O70481 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
Ubr1O70481 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Gm12628-201ENSMUST00000122193 382 ntBASIC15.49■□□□□ 0.07
Ubr1O70481 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC15.49■□□□□ 0.07
Ubr1O70481 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC15.49■□□□□ 0.07
Ubr1O70481 Lect2-202ENSMUST00000225183 823 ntBASIC15.49■□□□□ 0.07
Ubr1O70481 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC15.49■□□□□ 0.07
Ubr1O70481 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.49■□□□□ 0.07
Ubr1O70481 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Ubr1O70481 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubr1O70481 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms